BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B07SP1|AL426645
(742 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1344 1471 0.0
>3x_Contig1344
Length = 6608
Score = 1471 bits (742), Expect = 0.0
Identities = 742/742 (100%)
Strand = Plus / Minus
Query: 1 gacgactatgtcaacatggacgtcgaggatgagggcacagatgtcaatatgatgctatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4039 gacgactatgtcaacatggacgtcgaggatgagggcacagatgtcaatatgatgctatgt 3980
Query: 61 ctatatgacaaggtgctgagagtcaaaaataagtggaagtgtaatttaaaagaaggtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3979 ctatatgacaaggtgctgagagtcaaaaataagtggaagtgtaatttaaaagaaggtgta 3920
Query: 121 gtgacaatagaccataaagactttgctttccagaaagcccagggagaaagtgaatggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3919 gtgacaatagaccataaagactttgctttccagaaagcccagggagaaagtgaatggtaa 3860
Query: 181 ttatccatttccattagttccgtctccttgcattatttttctctttacttcaggttctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3859 ttatccatttccattagttccgtctccttgcattatttttctctttacttcaggttctaa 3800
Query: 241 agttaatatttttttttcctttctattctatcctactttctatcatagaggtttatgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3799 agttaatatttttttttcctttctattctatcctactttctatcatagaggtttatgttc 3740
Query: 301 atatctcctaatcattattgatgttaattcattattctctaaccttctgacactatataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3739 atatctcctaatcattattgatgttaattcattattctctaaccttctgacactatataa 3680
Query: 361 ttcatagaataatttatataatatcgcttgcaaagccgtccaaatcggatcttaatcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3679 ttcatagaataatttatataatatcgcttgcaaagccgtccaaatcggatcttaatcagg 3620
Query: 421 tacccatgtaaagttatatgtctttgagcacttcttttaagcagcattgcaaaagtcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3619 tacccatgtaaagttatatgtctttgagcacttcttttaagcagcattgcaaaagtcact 3560
Query: 481 aaaatatagcctgtctgtagcttattgatactttgtgttacttgtgagttatacagggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3559 aaaatatagcctgtctgtagcttattgatactttgtgttacttgtgagttatacagggaa 3500
Query: 541 atgtactaagaaatttttggtacacattttcaaagggtatgttactcattcatttggttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3499 atgtactaagaaatttttggtacacattttcaaagggtatgttactcattcatttggttg 3440
Query: 601 ctctttcgcctgtatccatagcttggagaatccaagtacaccagagcatagagacaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3439 ctctttcgcctgtatccatagcttggagaatccaagtacaccagagcatagagacaaaat 3380
Query: 661 ggcatatgtaccaggtggtgttttgatagagaacacatctgtagtatcagctaggaaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3379 ggcatatgtaccaggtggtgttttgatagagaacacatctgtagtatcagctaggaaatc 3320
Query: 721 aaagaatagtctagtcagatca 742
||||||||||||||||||||||
Sbjct: 3319 aaagaatagtctagtcagatca 3298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6352
Number of Sequences: 1807
Number of extensions: 6352
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 742
length of database: 10,358,551
effective HSP length: 16
effective length of query: 726
effective length of database: 10,329,639
effective search space: 7499317914
effective search space used: 7499317914
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)